STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LY75Uncharacterized protein. (1730 aa)    
Predicted Functional Partners:
IK
IK cytokine.
      
 0.700
HIVEP3
Human immunodeficiency virus type I enhancer binding protein 3.
   
 0.681
HIVEP2
Human immunodeficiency virus type I enhancer binding protein 2.
   
 0.594
TSPO
Translocator protein.
      
 0.570
ITGB6
Integrin beta; Belongs to the integrin beta chain family.
 
 
 
 0.568
C3
Uncharacterized protein.
    
 0.542
LOC102367579
Translocator protein 2.
      
 0.540
CD302
C-type lectin domain-containing protein.
    
 
0.515
POC5
POC5 centriolar protein homolog (Chlamydomonas).
      
 0.454
DAZL
RRM domain-containing protein.
      
 0.441
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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