LOC102350412 protein (Latimeria chalumnae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

LOC102350412

Ski_Sno domain-containing protein. (674 aa)

Predicted Functional Partners:

SMARCB1

0.780

MYSM1

0.772

PBRM1

0.749

SMARCE1

0.727

H3A6F0_LATCH

0.674

ACTL6A

0.674

ARID1A

0.643

ARID1B

0.643

SMARCD3

0.642

SMARCD1

0.642

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTL6A	ARID1A	ENSLACP00000016801	ENSLACP00000010032	Actin like 6A; Belongs to the actin family.	AT-rich interaction domain 1A.	0.658
ACTL6A	ARID1B	ENSLACP00000016801	ENSLACP00000022687	Actin like 6A; Belongs to the actin family.	AT-rich interaction domain 1B.	0.658
ACTL6A	LOC102350412	ENSLACP00000016801	ENSLACP00000003779	Actin like 6A; Belongs to the actin family.	Ski_Sno domain-containing protein.	0.674
ACTL6A	MYSM1	ENSLACP00000016801	ENSLACP00000002838	Actin like 6A; Belongs to the actin family.	Myb like, SWIRM and MPN domains 1.	0.843
ACTL6A	PBRM1	ENSLACP00000016801	ENSLACP00000000435	Actin like 6A; Belongs to the actin family.	Polybromo 1.	0.930
ACTL6A	SMARCB1	ENSLACP00000016801	ENSLACP00000010836	Actin like 6A; Belongs to the actin family.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.	0.976
ACTL6A	SMARCD1	ENSLACP00000016801	ENSLACP00000004574	Actin like 6A; Belongs to the actin family.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.733
ACTL6A	SMARCD3	ENSLACP00000016801	ENSLACP00000000992	Actin like 6A; Belongs to the actin family.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3.	0.733
ACTL6A	SMARCE1	ENSLACP00000016801	ENSLACP00000015784	Actin like 6A; Belongs to the actin family.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.900
ARID1A	ACTL6A	ENSLACP00000010032	ENSLACP00000016801	AT-rich interaction domain 1A.	Actin like 6A; Belongs to the actin family.	0.658
ARID1A	ARID1B	ENSLACP00000010032	ENSLACP00000022687	AT-rich interaction domain 1A.	AT-rich interaction domain 1B.	0.566
ARID1A	H3A6F0_LATCH	ENSLACP00000010032	ENSLACP00000005221	AT-rich interaction domain 1A.	Uncharacterized protein; Belongs to the actin family.	0.658
ARID1A	LOC102350412	ENSLACP00000010032	ENSLACP00000003779	AT-rich interaction domain 1A.	Ski_Sno domain-containing protein.	0.643
ARID1A	MYSM1	ENSLACP00000010032	ENSLACP00000002838	AT-rich interaction domain 1A.	Myb like, SWIRM and MPN domains 1.	0.826
ARID1A	PBRM1	ENSLACP00000010032	ENSLACP00000000435	AT-rich interaction domain 1A.	Polybromo 1.	0.852
ARID1A	SMARCB1	ENSLACP00000010032	ENSLACP00000010836	AT-rich interaction domain 1A.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.	0.980
ARID1A	SMARCD1	ENSLACP00000010032	ENSLACP00000004574	AT-rich interaction domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.887
ARID1A	SMARCD3	ENSLACP00000010032	ENSLACP00000000992	AT-rich interaction domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3.	0.747
ARID1A	SMARCE1	ENSLACP00000010032	ENSLACP00000015784	AT-rich interaction domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.961
ARID1B	ACTL6A	ENSLACP00000022687	ENSLACP00000016801	AT-rich interaction domain 1B.	Actin like 6A; Belongs to the actin family.	0.658