Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
H3A2C6_LATCHAmine oxidase. (501 aa)    
Predicted Functional Partners:
NIT2
Nitrilase family member 2.
    
 0.925
LOC102361022
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
     
 0.913
MAT2A
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
     
 0.913
TDO2
Tryptophan 2,3-dioxygenase.
   
 
 0.911
IDO2
Indoleamine 2,3-dioxygenase 1.
     
 0.911
LOC102349352
Amine oxidase.
  
  
 
0.909
DDO
D-aspartate oxidase.
  
 
 0.909
AOC1
Amine oxidase.
   
 
 0.909
MAOB
Amine oxidase.
  
  
 
0.909
LOC106703932
Amine oxidase.
  
  
 
0.909
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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