Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB11Zinc finger and BTB domain containing 11. (1038 aa)    
Predicted Functional Partners:
RPF1
Ribosome production factor 1 homolog.
    
   0.925
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
    
   0.712
RPL3
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.683
SNAPC1
Small nuclear RNA activating complex polypeptide 1.
    
 0.657
ANKRD27
Ankyrin repeat domain 27.
    
 0.597
DENR
Density-regulated protein; Belongs to the DENR family.
      
 0.589
RPL31
Ribosomal protein L31.
    
   0.573
RPL10
Ribosomal protein L10.
    
   0.540
PRSS12
Serine protease 12; Belongs to the peptidase S1 family.
    
 
 0.537
JAGN1
Jagunal homolog 1.
      
 0.517
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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