STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLTPGlycolipid transfer protein. (209 aa)    
Predicted Functional Partners:
PLEKHA3
Pleckstrin homology domain containing A3.
      
 0.750
UGCG
UDP-glucose ceramide glucosyltransferase.
      
 0.546
PDZD11
PDZ domain containing 11.
      
 0.504
MMAB
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
      
 0.489
AFDN
Afadin, adherens junction formation factor.
      
 0.433
PRPSAP2
Phosphoribosyl pyrophosphate synthetase associated protein 2.
   
  
 0.429
PRPSAP1
Phosphoribosyl pyrophosphate synthetase associated protein 1.
   
  
 0.429
PLLP
Plasmolipin.
    
 
 0.424
SPPL2A
Signal peptide peptidase like 2A.
      
 0.422
GPHA2
Glycoprotein hormones alpha chain; Belongs to the glycoprotein hormones subunit alpha family.
      
 0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.