Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3A2H2_LATCHUncharacterized protein. (795 aa)    
Predicted Functional Partners:
LOC102345259
Uncharacterized protein.
 
     0.878
H2ZZ85_LATCH
Uncharacterized protein.
 
     0.579
DCTN2
Dynactin subunit 2.
    
 0.564
LOC102354290
Uncharacterized protein.
    
  0.558
DYNLRB2
Dynein light chain roadblock.
   
 0.484
DCTN5
Dynactin subunit 5.
    
 0.453
TBC1D31
TBC1 domain family member 31.
   
 0.448
PAFAH1B1
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.
   
 0.448
DNAL4
Dynein light chain.
    
 0.447
DYNLL1
Dynein light chain.
    
 0.447
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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