PHF3 protein (Latimeria chalumnae) - STRING interaction network

Nodes:

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

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[Homology]

Score

PHF3

Uncharacterized protein. (1992 aa)

Predicted Functional Partners:

NIPBL

0.954

POLR2E

0.878

H3A8J5_LATCH

0.850

POLR2A

0.850

POLR2C

0.779

ERGIC3

0.761

SETD2

0.753

POLR2I

0.753

TRIP12

0.748

RCN3

0.747

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERGIC3	PHF3	ENSLACP00000021988	ENSLACP00000003848	ERGIC and golgi 3.	Uncharacterized protein.	0.761
ERGIC3	RCN3	ENSLACP00000021988	ENSLACP00000019012	ERGIC and golgi 3.	Reticulocalbin 3, EF-hand calcium binding domain.	0.849
H3A8J5_LATCH	PHF3	ENSLACP00000005966	ENSLACP00000003848	Uncharacterized protein.	Uncharacterized protein.	0.850
H3A8J5_LATCH	POLR2C	ENSLACP00000005966	ENSLACP00000004165	Uncharacterized protein.	RNA polymerase II subunit C.	0.974
H3A8J5_LATCH	POLR2E	ENSLACP00000005966	ENSLACP00000015549	Uncharacterized protein.	RNA polymerase II subunit E.	0.974
H3A8J5_LATCH	POLR2I	ENSLACP00000005966	ENSLACP00000010899	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.974
H3A8J5_LATCH	SETD2	ENSLACP00000005966	ENSLACP00000008064	Uncharacterized protein.	SET domain containing 2, histone lysine methyltransferase.	0.920
NIPBL	PHF3	ENSLACP00000005851	ENSLACP00000003848	Nipped-B protein.	Uncharacterized protein.	0.954
NIPBL	SETD2	ENSLACP00000005851	ENSLACP00000008064	Nipped-B protein.	SET domain containing 2, histone lysine methyltransferase.	0.762
NIPBL	TRIP12	ENSLACP00000005851	ENSLACP00000010629	Nipped-B protein.	Thyroid hormone receptor interactor 12.	0.439
PHF3	ERGIC3	ENSLACP00000003848	ENSLACP00000021988	Uncharacterized protein.	ERGIC and golgi 3.	0.761
PHF3	H3A8J5_LATCH	ENSLACP00000003848	ENSLACP00000005966	Uncharacterized protein.	Uncharacterized protein.	0.850
PHF3	NIPBL	ENSLACP00000003848	ENSLACP00000005851	Uncharacterized protein.	Nipped-B protein.	0.954
PHF3	POLR2A	ENSLACP00000003848	ENSLACP00000013716	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.850
PHF3	POLR2C	ENSLACP00000003848	ENSLACP00000004165	Uncharacterized protein.	RNA polymerase II subunit C.	0.779
PHF3	POLR2E	ENSLACP00000003848	ENSLACP00000015549	Uncharacterized protein.	RNA polymerase II subunit E.	0.878
PHF3	POLR2I	ENSLACP00000003848	ENSLACP00000010899	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.753
PHF3	RCN3	ENSLACP00000003848	ENSLACP00000019012	Uncharacterized protein.	Reticulocalbin 3, EF-hand calcium binding domain.	0.747
PHF3	SETD2	ENSLACP00000003848	ENSLACP00000008064	Uncharacterized protein.	SET domain containing 2, histone lysine methyltransferase.	0.753
PHF3	TRIP12	ENSLACP00000003848	ENSLACP00000010629	Uncharacterized protein.	Thyroid hormone receptor interactor 12.	0.748