Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYBPC1Myosin binding protein C, slow type. (1127 aa)    
Predicted Functional Partners:
WASHC3
WASH complex subunit 3.
      
 0.847
MYL3
Myosin, light chain 13.
   
 0.841
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.701
TNNC1
Troponin C type 1a (slow).
   
 0.686
LOC102347576
SH3 domain-containing protein.
   
 0.684
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.678
MYL2
Myosin light chain 2.
   
 0.676
H3BF30_LATCH
Uncharacterized protein.
   
 0.676
ADAMTSL3
ADAMTS like 3.
      
 0.651
WDR18
WD repeat domain 18.
   
 0.648
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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