Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102348625Adhesion G protein-coupled receptor B1a. (589 aa)    
Predicted Functional Partners:
ADGRB3
Adhesion G protein-coupled receptor B3.
 
      0.900
LOC102345465
Uncharacterized protein.
   
 0.891
H3AN32_LATCH
Uncharacterized protein.
   
 0.891
RANGAP1
Ran GTPase activating protein 1.
   
 0.826
KPNB1
Karyopherin subunit beta 1.
   
 0.816
IPO8
Importin 8.
   
 0.679
XPOT
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 0.679
IPO7
Importin 7.
   
 0.679
RANGRF
Uncharacterized protein.
    
 
 0.643
FANCA
FA complementation group A.
   
 
 0.610
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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