STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102348625Adhesion G protein-coupled receptor B1a. (589 aa)    
Predicted Functional Partners:
LOC102345465
Uncharacterized protein.
   
 0.982
H3AN32_LATCH
Uncharacterized protein.
   
 0.982
ADGRB3
Adhesion G protein-coupled receptor B3.
 
      0.900
RANGAP1
Ran GTPase activating protein 1.
   
 0.870
KPNB1
Karyopherin subunit beta 1.
   
 0.856
NUP153
Nucleoporin 153.
    
 0.793
XPOT
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 0.732
NUP50
Nucleoporin 50.
   
  0.716
GCC2
GRIP and coiled-coil domain containing 2.
   
 0.710
RANBP1
RAN binding protein 1.
   
 0.710
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.