STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A2L0_LATCHUncharacterized protein. (143 aa)    
Predicted Functional Partners:
KPTN
Kaptin, actin binding protein.
    
 0.972
ITFG2
Integrin alpha FG-GAP repeat containing 2.
    
 0.970
C12orf66
Chromosome 12 open reading frame 66.
    
 0.970
DEPDC5
DEP domain containing 5.
    
 0.945
WDR59
WD repeat domain 59.
    
 0.940
NPRL3
NPR3 like, GATOR1 complex subunit.
    
 0.938
WDR24
WD repeat domain 24.
    
 0.938
NPRL2
NPR2 like, GATOR1 complex subunit.
    
 0.934
SZT2
Uncharacterized protein.
 
      0.899
LAMP1
Lysosomal associated membrane protein 1.
    
   0.848
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.