STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102353586ADP-ribosylarginine hydrolase. (356 aa)    
Predicted Functional Partners:
UBE2M
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.778
MTO1
Mitochondrial tRNA translation optimization 1.
   
  
 0.778
BRD2
Bromodomain containing 2.
    
 
 0.697
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.695
CACUL1
CDK2 associated cullin domain 1; Belongs to the cullin family.
   
 0.675
CUL1
Cullin 1; Belongs to the cullin family.
   
 0.675
CUL3
Cullin 3; Belongs to the cullin family.
   
 0.675
UBXN7
UBX domain-containing protein 7.
     
 0.674
LOC102346391
Uncharacterized protein.
      
 0.669
CUL2
Cullin 2; Belongs to the cullin family.
   
 0.606
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.