STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A2N7_LATCHZgc:154075. (358 aa)    
Predicted Functional Partners:
TGDS
TDP-glucose 4,6-dehydratase.
  
 
 0.706
RGN
Regucalcin.
  
 
 0.642
GALK2
Galactokinase 2.
  
 
 0.606
GALK1
Galactokinase 1.
  
 
 0.606
SORD
Sorbitol dehydrogenase.
  
 
 0.554
KARS1
Lysine--tRNA ligase.
  
    0.521
LOC102356272
Lysine--tRNA ligase.
  
    0.521
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.476
XYLB
Xylulokinase.
  
  
 0.474
CPOX
Coproporphyrinogen oxidase.
   
 
 0.463
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.