STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD5Sterile alpha motif domain containing 5. (176 aa)    
Predicted Functional Partners:
LOC102358853
Uncharacterized protein.
 
    
 0.888
STXBP5
Syntaxin binding protein 5.
   
  
 0.742
SAMSN1
SAM domain, SH3 domain and nuclear localization signals 1.
 
      0.739
ADGB
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
      
 0.722
RAB32
Uncharacterized protein.
      
 0.720
GRM1
Glutamate metabotropic receptor 1.
      
 0.660
SAMD14
Sterile alpha motif domain containing 14.
      
 0.557
FOXRED2
FAD dependent oxidoreductase domain containing 2.
    
 
 0.546
KBTBD7
Kelch repeat and BTB (POZ) domain containing 7.
      
 0.523
PRPSAP1
Phosphoribosyl pyrophosphate synthetase associated protein 1.
      
 0.513
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.