STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCF2LMCF.2 cell line derived transforming sequence like. (1140 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 0.874
LOC102348524
Uncharacterized protein.
    
 0.670
LOC102350273
Uncharacterized protein.
    
 0.670
RHOA
Uncharacterized protein.
    
 0.670
RHOC
Ras homolog family member Cb.
    
 0.670
RND3
Rho family GTPase 3.
    
 0.521
RND1
Rho family GTPase 1.
    
 0.521
LOC102362077
Ras homolog gene family, member Gc.
    
 0.496
RHOG
Ras homolog family member G.
    
 0.496
RHOD
Uncharacterized protein.
    
 0.487
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.