PCDH9 protein (Latimeria chalumnae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

PCDH9

Protocadherin 9. (1032 aa)

Predicted Functional Partners:

H2ZY56_LATCH

0.899

CTNNAL1

0.605

ST6GAL2

0.594

SLC37A3

0.580

SETD4

0.579

CTNND2

0.526

CTNND1

0.525

H2ZS19_LATCH

0.452

KIF1A

0.446

LOC102345919

0.442

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTNNAL1	CTNND1	ENSLACP00000015029	ENSLACP00000006852	Catenin alpha like 1.	Catenin delta 1.	0.683
CTNNAL1	CTNND2	ENSLACP00000015029	ENSLACP00000013244	Catenin alpha like 1.	Uncharacterized protein.	0.666
CTNNAL1	PCDH9	ENSLACP00000015029	ENSLACP00000003955	Catenin alpha like 1.	Protocadherin 9.	0.605
CTNND1	CTNNAL1	ENSLACP00000006852	ENSLACP00000015029	Catenin delta 1.	Catenin alpha like 1.	0.683
CTNND1	CTNND2	ENSLACP00000006852	ENSLACP00000013244	Catenin delta 1.	Uncharacterized protein.	0.841
CTNND1	PCDH9	ENSLACP00000006852	ENSLACP00000003955	Catenin delta 1.	Protocadherin 9.	0.525
CTNND2	CTNNAL1	ENSLACP00000013244	ENSLACP00000015029	Uncharacterized protein.	Catenin alpha like 1.	0.666
CTNND2	CTNND1	ENSLACP00000013244	ENSLACP00000006852	Uncharacterized protein.	Catenin delta 1.	0.841
CTNND2	PCDH9	ENSLACP00000013244	ENSLACP00000003955	Uncharacterized protein.	Protocadherin 9.	0.526
H2ZS19_LATCH	H2ZY56_LATCH	ENSLACP00000000190	ENSLACP00000002327	Uncharacterized protein.	Uncharacterized protein.	0.452
H2ZS19_LATCH	LOC102345919	ENSLACP00000000190	ENSLACP00000002252	Uncharacterized protein.	Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.	0.515
H2ZS19_LATCH	PCDH9	ENSLACP00000000190	ENSLACP00000003955	Uncharacterized protein.	Protocadherin 9.	0.452
H2ZS19_LATCH	SETD4	ENSLACP00000000190	ENSLACP00000006715	Uncharacterized protein.	SET domain containing 4.	0.633
H2ZS19_LATCH	SLC37A3	ENSLACP00000000190	ENSLACP00000017585	Uncharacterized protein.	MFS domain-containing protein.	0.444
H2ZY56_LATCH	H2ZS19_LATCH	ENSLACP00000002327	ENSLACP00000000190	Uncharacterized protein.	Uncharacterized protein.	0.452
H2ZY56_LATCH	LOC102345919	ENSLACP00000002327	ENSLACP00000002252	Uncharacterized protein.	Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.	0.442
H2ZY56_LATCH	PCDH9	ENSLACP00000002327	ENSLACP00000003955	Uncharacterized protein.	Protocadherin 9.	0.899
H2ZY56_LATCH	SETD4	ENSLACP00000002327	ENSLACP00000006715	Uncharacterized protein.	SET domain containing 4.	0.579
H2ZY56_LATCH	SLC37A3	ENSLACP00000002327	ENSLACP00000017585	Uncharacterized protein.	MFS domain-containing protein.	0.580
H2ZY56_LATCH	ST6GAL2	ENSLACP00000002327	ENSLACP00000004470	Uncharacterized protein.	ST6 beta-galactoside alpha-2,6-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.	0.594