STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP1BCharged multivesicular body protein 1B. (161 aa)    
Predicted Functional Partners:
CHMP2A
Charged multivesicular body protein 2A.
   
0.993
LOC102356960
Charged multivesicular body protein 3.
 
 
 0.993
VTA1
Vta1 domain-containing protein.
    
 0.992
CHMP5
Charged multivesicular body protein 5.
   
 0.991
VPS4A
Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.
   
 0.988
CHMP4A
Charged multivesicular body protein 4A.
    
 0.969
CHMP4B
Charged multivesicular body protein 4B.
    
 0.969
CHMP2B
Charged multivesicular body protein 2B.
   
 0.962
CHMP7
Charged multivesicular body protein 7.
    
 0.958
IST1
IST1 factor associated with ESCRT-III.
    
 
 0.930
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.