STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A2W3_LATCHKazal-like domain-containing protein. (237 aa)    
Predicted Functional Partners:
IBSP
Uncharacterized protein.
   
  
 0.703
NUDT9
Nudix hydrolase 9.
      
 0.699
NOP58
NOP58 ribonucleoprotein.
      
 0.668
MLF1
Myeloid leukemia factor 1.
      
 0.537
CD93
CD93 molecule.
   
   0.537
LOC102359827
Uncharacterized protein.
   
  
 0.490
MYOC
Myocilin.
    
 
 0.479
CYYR1
Cysteine and tyrosine rich 1.
   
    0.476
PKD2
Polycystin 2, transient receptor potential cation channel.
      
 0.473
FGF5
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.468
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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