STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SALL1Spalt like transcription factor 1. (1306 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interaction domain 4A.
      
 0.685
GATAD2B
GATA zinc finger domain containing 2B.
    
 0.663
LOC102362664
POU domain protein.
   
 0.659
LOC102355666
POU domain protein.
   
 0.659
RBBP7
WD_REPEATS_REGION domain-containing protein.
    
 0.652
LOC102347269
Retinoblastoma binding protein 4, like.
    
 0.652
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.652
HOXD12
Homeobox D12.
   
 
 0.639
GATAD2A
GATA zinc finger domain containing 2A.
    
 0.619
BSX
Brain-specific homeobox.
   
 0.602
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.