Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SOGA3SOGA family member 3a. (1247 aa)    
Predicted Functional Partners:
CCDC177
Uncharacterized protein.
      
 0.815
NRBF2
Nuclear receptor binding factor 2.
    
   0.709
CYB5R4
Cytochrome b5 reductase 4.
      
 0.676
RBM33
RNA binding motif protein 33.
      
 0.628
TRIP13
Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family.
    
 
 0.626
SPATA5
Spermatogenesis associated 5.
    
 
 0.583
SPATA5L1
Spermatogenesis associated 5 like 1.
    
 
 0.583
LOC102364097
Uncharacterized protein.
      
 0.582
CCDC185
Uncharacterized protein.
      
 0.582
RIPPLY2
Ripply transcriptional repressor 2.
      
 0.566
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.