Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HDLBPUncharacterized protein. (1268 aa)    
Predicted Functional Partners:
RRBP1
Ribosome binding protein 1.
   
 0.891
RACK1
Receptor for activated C kinase 1.
   
 
 0.828
EIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
      
 0.777
LOC102348026
Uncharacterized protein.
   
   0.774
LOC102358575
Uncharacterized protein.
   
   0.774
DNAJC2
DnaJ heat shock protein family (Hsp40) member C2.
   
   0.744
TENT5C
Terminal nucleotidyltransferase 5C.
    
 
 0.744
NUDCD1
NudC domain containing 1.
    
   0.714
LOC102365063
Apolipoprotein A-IV b, tandem duplicate 2.
     
 0.710
EIF2S2
Eukaryotic translation initiation factor 2 subunit beta.
   
   0.697
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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