Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SUDS3SDS3 homolog, SIN3A corepressor complex component. (319 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interaction domain 4A.
   
 0.994
SAP130
Sin3A associated protein 130.
   
 0.975
SAP18
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
    
 0.973
SINHCAF
SIN3-HDAC complex associated factor.
    
 
 0.971
ING2
Inhibitor of growth protein.
    
 
 0.971
MXD1
MAX dimerization protein 1.
    
 
 0.963
SAP30
Sin3A associated protein 30.
   
 0.961
SAP30L
SAP30 like.
   
 0.961
BRMS1L
BRMS1 like transcriptional repressor.
    
 0.943
ING1
Inhibitor of growth protein.
    
 
 0.938
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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