STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NKX3-2NK3 homeobox 2. (282 aa)    
Predicted Functional Partners:
FOXF2
Forkhead box F2a.
   
 
 0.602
FOXF1
Forkhead box F1.
   
 
 0.583
RAB28
Uncharacterized protein.
      
 0.570
HAND2
Heart and neural crest derivatives expressed 2.
    
 
 0.547
BARX1
BARX homeobox 1.
   
  
0.518
PAX1
Paired box 1.
      
 0.514
TCF21
Transcription factor 21.
    
 
 0.478
MOSPD1
Motile sperm domain containing 1.
      
 0.446
PAX9
Paired box 9.
      
 0.428
EDN1
Endothelin 1.
      
 0.426
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.