Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNNT1Troponin T1, slow skeletal type. (253 aa)    
Predicted Functional Partners:
TNNI2
Troponin I2, fast skeletal type.
  
 0.981
TNNI3
Uncharacterized protein.
  
 0.953
TNNI1
Troponin I1, slow skeletal type.
 
 0.952
LOC102350553
Uncharacterized protein.
  
 0.952
LOC102353564
Uncharacterized protein.
   
 0.934
TNNC1
Troponin C type 1a (slow).
   
 0.934
DNAAF3
Uncharacterized protein.
   
 0.902
H3BH85_LATCH
Uncharacterized protein.
   
 0.881
LOC102352170
Uncharacterized protein.
   
 0.881
MYL3
Myosin, light chain 13.
   
 0.845
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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