STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PARP8Poly [ADP-ribose] polymerase. (775 aa)    
Predicted Functional Partners:
RPL11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.881
RPL23A
Ribosomal protein L23a.
  
 
 0.874
RPL32
Ribosomal protein L32.
  
   0.845
GPI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.841
RPL35
Ribosomal protein L35.
  
   0.838
RPS15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.834
RPL15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 
 0.817
RPS3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.817
RPS11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.792
PGK1
Phosphoglycerate kinase.
  
 0.792
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.