STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A352_LATCHEndo/exonuclease/phosphatase domain-containing protein. (247 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.565
H2ZSJ3_LATCH
Uncharacterized protein.
  
     0.533
H3AEA7_LATCH
Uncharacterized protein.
  
     0.531
H3A3Q6_LATCH
Uncharacterized protein.
  
     0.525
H2ZWX3_LATCH
Uncharacterized protein.
  
     0.518
H3AWN5_LATCH
Endo/exonuclease/phosphatase domain-containing protein.
  
     0.509
H2ZRY8_LATCH
Endo/exonuclease/phosphatase domain-containing protein.
  
     0.496
H3A3J9_LATCH
Endo/exonuclease/phosphatase domain-containing protein.
  
     0.493
H3ADV5_LATCH
Uncharacterized protein.
  
     0.490
RPL21
Ribosomal protein L21.
   
   0.490
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.