Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNTN1Contactin 1. (1009 aa)    
Predicted Functional Partners:
NRCAM
Neuronal cell adhesion molecule.
   
0.974
CNTNAP1
Contactin associated protein 1.
   
 0.941
PTPRZ1
Protein tyrosine phosphatase receptor type Z1.
   
 
 0.935
NFASC
Neurofascin.
   
0.918
BCAM
Uncharacterized protein.
    
  0.909
MCAM
Melanoma cell adhesion molecule.
    
  0.909
CNTNAP5
Contactin associated protein like 5.
   
 0.787
CHL1
Cell adhesion molecule L1 like.
   
 0.755
L1CAM
L1 cell adhesion molecule.
   
 0.755
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 
 0.725
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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