Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3A360_LATCHPX domain-containing protein. (140 aa)    
Predicted Functional Partners:
SNX22
Sorting nexin 22.
    
   0.958
GAPVD1
GTPase activating protein and VPS9 domains 1.
    
 
 0.952
CSNK1A1
Casein kinase 1 alpha 1.
    
   0.903
GMCL1
Germ cell-less, spermatogenesis associated.
      
 0.799
ZNF618
Zinc finger protein 618.
    
   0.761
FAM136A
Family with sequence similarity 136 member A.
      
 0.701
GGCX
Gamma-glutamyl carboxylase.
      
 0.695
CSNK1E
Casein kinase 1, epsilon; Belongs to the protein kinase superfamily.
    
   0.684
CSNK1D
Casein kinase 1 delta.
    
   0.684
ZAP70
Tyrosine-protein kinase.
     
 0.683
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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