Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARHGDIBRho GDP dissociation inhibitor beta. (149 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
   
 0.903
LOC102348524
Uncharacterized protein.
   
 0.805
LOC102350273
Uncharacterized protein.
   
 0.805
RHOA
Uncharacterized protein.
   
 0.805
RHOC
Ras homolog family member Cb.
   
 0.805
RHOH
Ras homolog family member H.
   
 0.770
LOC102362077
Ras homolog gene family, member Gc.
   
 0.762
RHOG
Ras homolog family member G.
   
 0.762
LOC102351732
Uncharacterized protein.
   
 0.758
RAC1
Rac family small GTPase 1.
   
 0.758
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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