Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KIRREL3Kirre like nephrin family adhesion molecule 3. (638 aa)    
Predicted Functional Partners:
H3AR28_LATCH
Uncharacterized protein.
   
 0.918
TJP1
Tight junction protein 1; Belongs to the MAGUK family.
    
 
 0.810
NCK2
Cytoplasmic protein.
    
 0.683
NPHS2
NPHS2 stomatin family member, podocin.
    
 0.637
NCK1
Cytoplasmic protein.
    
 0.617
CD2AP
CD2 associated protein.
    
 0.601
LAG3
Uncharacterized protein.
      
 0.543
PSMB10
Proteasome subunit beta.
     
 0.526
SRMS
Tyrosine-protein kinase.
    
  0.498
FYN
Tyrosine-protein kinase.
    
  0.498
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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