STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIRREL3Kirre like nephrin family adhesion molecule 3. (638 aa)    
Predicted Functional Partners:
H3AR28_LATCH
Uncharacterized protein.
   
0.952
TJP1
Tight junction protein 1; Belongs to the MAGUK family.
    
 0.632
NCK2
Cytoplasmic protein.
    
 0.582
NCK1
Cytoplasmic protein.
    
 0.578
NPHS2
NPHS2 stomatin family member, podocin.
    
 0.554
CD2AP
CD2 associated protein.
    
 0.538
PSMB10
Proteasome subunit beta.
      
 0.499
SRMS
Tyrosine-protein kinase.
    
 0.493
FYN
Tyrosine-protein kinase.
    
 0.493
FGR
Tyrosine-protein kinase.
    
 0.493
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.