Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABCG1ATP binding cassette subfamily G member 1. (649 aa)    
Predicted Functional Partners:
ABCG5
ATP binding cassette subfamily G member 5.
   
0.793
ABCD4
ATP-binding cassette, sub-family D (ALD), member 4.
   
  
 0.737
ABCC12
ATP binding cassette subfamily C member 12.
   
 0.697
ABCC5
ATP binding cassette subfamily C member 5.
   
0.659
LOC102365063
Apolipoprotein A-IV b, tandem duplicate 2.
   
 0.629
ABCB8
ATP binding cassette subfamily B member 8.
   
0.628
ABCB10
ATP binding cassette subfamily B member 10.
   
0.618
RUSC2
RUN and SH3 domain containing 2.
      
 0.615
ABCC3
ATP-binding cassette, sub-family C (CFTR/MRP), member 3.
   
 0.605
H3AES0_LATCH
ATP-binding cassette, sub-family C (CFTR/MRP), member 3.
   
 0.605
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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