Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCDHGA11Uncharacterized protein. (3430 aa)    
Predicted Functional Partners:
STXBP5L
Syntaxin binding protein 5 like.
      
 0.814
NRG2
Neuregulin 2.
   
 
 0.760
GRIK5
Glutamate ionotropic receptor kainate type subunit 5.
      
 0.657
ARHGAP32
Rho GTPase activating protein 32.
     
 0.458
ARHGAP32-2
Uncharacterized protein.
     
 0.458
FANCL
FA complementation group L.
     
 0.430
GRM3
Glutamate metabotropic receptor 3.
      
 0.424
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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