STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102348028Rh50-like protein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily. (476 aa)    
Predicted Functional Partners:
H3B7E2_LATCH
Rh blood group, D antigen; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
  
 
0.881
TGM2
Transglutaminase 2.
   
 
 0.788
LOC102354684
Immunoresponsive gene 1, like.
   
  
 0.669
H3A0M2_LATCH
Uncharacterized protein.
   
  
 0.667
H3AEK5_LATCH
Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.662
MEP1B
Meprin A subunit beta.
      
 0.576
STOM
Stomatin.
   
  
 0.558
EPB41
Erythrocyte membrane protein band 4.1.
      
 0.548
STK16
Serine/threonine kinase 16.
      
 0.504
EIF1AX
Eukaryotic translation initiation factor 1A X-linked b.
      
 0.501
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.