Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC102360626HECT domain-containing protein. (629 aa)    
Predicted Functional Partners:
H2ZRS3_LATCH
Uncharacterized protein.
 
      0.899
LOC102354416
Uncharacterized protein.
   
 0.728
RSAD2
Radical S-adenosyl methionine domain containing 2.
   
 
 0.637
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.616
UBE2L6
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.579
DDX58
DExD/H-box helicase 58.
   
 
 0.559
PXMP2
Peroxisomal membrane protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.
   
  
 0.554
RPS27A
Ribosomal protein S27a.
    
 0.530
RCBTB1
RCC1 and BTB domain containing protein 1.
 
 
  0.512
SACS
Sacsin molecular chaperone.
    
 
 0.506
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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