STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKDD1BAnkyrin repeat and death domain containing 1B. (501 aa)    
Predicted Functional Partners:
RNF146
Ring finger protein 146.
    
 0.726
AXIN1
Axin 1.
    
 0.670
AXIN2
Axin 2.
    
 0.670
CDH24
Cadherin 24; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.562
TMEM30B
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 
 0.557
SPTBN1
Spectrin beta chain; Belongs to the spectrin family.
   
 0.542
SPTB
Spectrin beta chain; Belongs to the spectrin family.
   
 0.542
H3BDJ8_LATCH
Spectrin beta chain; Belongs to the spectrin family.
   
 0.542
SPTBN5
Spectrin beta, non-erythrocytic 5.
   
 0.542
SPTBN2
Spectrin beta chain; Belongs to the spectrin family.
   
 0.542
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.