STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLQCollagen like tail subunit of asymmetric acetylcholinesterase. (452 aa)    
Predicted Functional Partners:
MUSK
Muscle associated receptor tyrosine kinase.
    
 0.713
HACL1
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
 
      0.694
DOK7
Docking protein 7.
      
 0.609
TNNC1
Troponin C type 1a (slow).
    
 
 0.593
MYO1A
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.574
COL6A1-2
Uncharacterized protein.
   
 0.560
HSPG2
Heparan sulfate proteoglycan 2.
    
 
 0.557
RAPSN
Receptor associated protein of the synapse.
      
 0.556
MYBPC3
Myosin binding protein C, cardiac.
    
 0.549
FPGT
TNNI3 interacting kinase.
    
 0.548
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.