Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FOXRED2FAD dependent oxidoreductase domain containing 2. (659 aa)    
Predicted Functional Partners:
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.961
TXNDC16
Thioredoxin domain containing 16.
    
 
 0.960
NDUFAF3
NADH:ubiquinone oxidoreductase complex assembly factor 3.
    
   0.915
HMGXB4
HMG-box containing 4.
      
 0.868
RASD2
RASD family member 2.
    
 
 0.857
VDAC2
Voltage dependent anion channel 2.
   
   0.804
SEL1L2
SEL1L2 adaptor subunit of ERAD E3 ligase.
    
 
 0.731
ERLEC1
Endoplasmic reticulum lectin 1.
    
 
 0.717
OS9
OS9 endoplasmic reticulum lectin.
    
 
 0.717
RBFOX2
RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.
      
 0.698
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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