STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102353186Hes family bHLH transcription factor 6. (236 aa)    
Predicted Functional Partners:
KCNJ9
Potassium voltage-gated channel subfamily J member 9.
      
 0.537
CACNA2D2
VWFA domain-containing protein.
      
 0.537
MYF6
Myogenic factor 6.
    
 
 0.517
ZNF750
Zinc finger protein 750.
      
 0.513
CDS1
Phosphatidate cytidylyltransferase; Provides CDP-diacylglycerol, an important precursor for the synthesis of phosphatidylinositol, phosphatidylglycerol, and cardiolipin.
      
 0.508
KCNA3
Potassium voltage-gated channel subfamily A member 3; Belongs to the potassium channel family.
      
 0.499
CHRNA7
Cholinergic receptor, nicotinic, alpha 7 (neuronal).
      
 0.499
MSC
Musculin.
    
 
 0.467
GPR22
G protein-coupled receptor 22.
      
 0.435
ASCL1
Achaete-scute family bHLH transcription factor 1.
    
 
 0.426
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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