STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC7A13Uncharacterized protein. (270 aa)    
Predicted Functional Partners:
SLC3A1
Solute carrier family 3 member 1.
   
 0.889
H3A9B7_LATCH
Uncharacterized protein.
   
 0.732
LOC102352322
Aamy domain-containing protein.
   
 0.732
SLC7A3
Solute carrier family 7 member 3.
  
 
0.538
H3BH83_LATCH
Cyclic nucleotide-binding domain-containing protein.
    
 
 0.533
LOC102353669
Solute carrier family 7 member 9.
 
     0.515
KIAA0513
KIAA0513.
   
 0.481
ALKBH2
AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
   
 0.481
ALKBH3
AlkB homolog 3, alpha-ketoglutaratedependent dioxygenase.
   
 0.481
SLC5A2
Solute carrier family 5 member 2; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
  
 0.480
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.