STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R3EProtein phosphatase 1 regulatory subunit 3E. (294 aa)    
Predicted Functional Partners:
GYS1
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.735
GYS2
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.735
GYG2
Glycogenin 2.
   
 0.585
GYG1
Glycogenin 1.
   
 0.585
DEPDC5
DEP domain containing 5.
    
 0.536
C12orf66
Chromosome 12 open reading frame 66.
    
 0.515
NPRL3
NPR3 like, GATOR1 complex subunit.
   
 0.512
ITFG2
Integrin alpha FG-GAP repeat containing 2.
    
 0.497
PPP1CA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.488
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.488
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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