Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3A3I5_LATCHErythrocyte membrane protein band 4.1 like 4B. (325 aa)    
Predicted Functional Partners:
PTPN4
PDZ domain-containing protein.
 
 
  
 0.902
RPL3
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.683
FRRS1L
Ferric chelate reductase 1 like.
      
 0.678
LIMCH1
LIM and calponin homology domains 1.
      
 0.657
IQSEC2
IQ motif and Sec7 domain 2.
      
 0.657
H3B1U0_LATCH
Uncharacterized protein.
      
 0.656
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.645
ESR2
Estrogen receptor 2.
      
 0.626
SCNN1G
Sodium channel epithelial 1 gamma subunit; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.615
NSMAF
Neutral sphingomyelinase activation associated factor.
      
 0.610
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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