STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A3I5_LATCHErythrocyte membrane protein band 4.1 like 4B. (325 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.968
PTPN4
PDZ domain-containing protein.
 
 
    0.901
LIMCH1
LIM and calponin homology domains 1.
      
 0.574
IQSEC2
IQ motif and Sec7 domain 2.
      
 0.573
H3B1U0_LATCH
Uncharacterized protein.
      
 0.572
FRRS1L
Ferric chelate reductase 1 like.
      
 0.545
LOC102362769
Protein tyrosine phosphatase receptor type Jb, tandem duplicate 2.
 
      0.536
MPP1
Membrane palmitoylated protein 1; Belongs to the MAGUK family.
 
  
 0.535
PTPN2
Tyrosine-protein phosphatase non-receptor type.
 
      0.481
MPP6
Uncharacterized protein; Belongs to the MAGUK family.
 
  
 0.481
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.