STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC134Coiled-coil domain containing 134. (243 aa)    
Predicted Functional Partners:
XPO1
Exportin 1.
     
 0.557
APBA3
Amyloid beta precursor protein binding family A member 3.
      
 0.555
H3ACA4_LATCH
Ig-like domain-containing protein.
      
 0.478
TMED2
Transmembrane p24 trafficking protein 2.
   
 
 0.464
ZBTB20
Zinc finger and BTB domain containing 20.
    
 0.445
RPL3
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.424
MEI1
Meiotic double-stranded break formation protein 1.
 
    
 0.423
MESD
Mesoderm development LRP chaperone.
      
 0.420
MCRIP1
MAPK regulated corepressor interacting protein 1.
      
 0.420
FBXW5
F-box and WD repeat domain containing 5.
      
 0.418
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.