Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102358239TRAF3 interacting protein 2-like. (392 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.931
TRAF3IP2
SEFIR domain-containing protein.
  
  
 
0.906
TRAF5
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.825
H3B6K7_LATCH
IKKbetaNEMObind domain-containing protein.
    
 
 0.775
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.747
H3AZ94_LATCH
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.747
CD40
TNFR-Cys domain-containing protein.
    
 
 0.742
IRAK4
Interleukin 1 receptor associated kinase 4.
    
 0.672
NFKBIA
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
    
 0.605
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 
 0.598
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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