Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
H3A3L8_LATCHUncharacterized protein. (384 aa)    
Predicted Functional Partners:
ASB7
Ankyrin repeat and SOCS box containing 7.
      
 0.641
FBXL17
F-box and leucine rich repeat protein 17.
      
 0.636
SLC35F1
Solute carrier family 35 member F1.
   
  
 0.615
SBSPON
Somatomedin B and thrombospondin type 1 domain containing.
     
 0.596
WDR48
WD repeat domain 48.
      
 0.596
SUFU
SUFU negative regulator of hedgehog signaling.
      
 0.593
NDUFAF2
NADH:ubiquinone oxidoreductase complex assembly factor 2.
      
 0.593
PKHD1
PKHD1 ciliary IPT domain containing fibrocystin/polyductin.
      
 0.593
ARHGAP26
Rho GTPase activating protein 26.
      
 0.593
PIANP
PILR alpha associated neural protein.
      
 0.589
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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