STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCCIPProtein BCCIP homolog; Belongs to the BCP1 family. (300 aa)    
Predicted Functional Partners:
RPF2
Ribosome production factor 2 homolog.
   
  
 0.884
BRIX1
Biogenesis of ribosomes BRX1.
   
    0.876
EIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
    
 
 0.854
LOC102348310
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.829
LOC102350741
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.829
TENT5B
Uncharacterized protein.
    
 
 0.820
EBNA1BP2
EBNA1 binding protein 2.
   
    0.808
MRTO4
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
    0.748
SCML2
Scm polycomb group protein like 2.
      
 0.744
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
    0.743
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.