Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC102361685Pentaxin. (232 aa)    
Predicted Functional Partners:
FGG
Fibrinogen gamma chain.
   
 
 0.617
FGB
Fibrinogen beta chain.
   
 
 0.615
TTR
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
   
 
 0.591
CPB2
Carboxypeptidase B2.
   
    0.548
MASP2
Mannan binding lectin serine peptidase 2; Belongs to the peptidase S1 family.
   
 
 0.545
APOH
Apolipoprotein H.
   
 
 0.534
C11orf53
Chromosome 11 open reading frame 53.
      
 0.529
SERPINC1
Serpin family C member 1; Belongs to the serpin family.
   
  
 0.509
C9
Complement C9.
   
  
 0.495
IL6
Uncharacterized protein.
      
 0.493
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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