Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ILF3Interleukin enhancer binding factor 3. (903 aa)    
Predicted Functional Partners:
ILF2
Interleukin enhancer binding factor 2.
   
 0.999
EIF2AK2
Protein kinase domain-containing protein.
    
 0.994
STRBP
Spermatid perinuclear RNA binding protein.
   
   0.990
DHX9
DExH-box helicase 9.
   
 
 0.985
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 
 0.973
HNRNPC
RRM domain-containing protein.
   
 
 0.972
XPO5
Exportin 5.
    
 
 0.961
RPL3
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.958
STAU1
Staufen double-stranded RNA binding protein 1.
    
 
 0.957
SF3B4
Splicing factor 3b subunit 4.
   
 
 0.953
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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