STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC2Transmembrane channel-like protein. (908 aa)    
Predicted Functional Partners:
CIB2
Calcium and integrin binding family member 2.
    
 0.880
CIB3
Calcium and integrin binding family member 3.
    
 0.776
OTOGL
Otogelin like.
    
 0.704
PCDH15
Protocadherin related 15.
    
 0.668
LHFPL5
LHFPL tetraspan subfamily member 5.
   
 
 0.634
LHFPL4
LHFPL tetraspan subfamily member 4.
   
 
 0.634
CIB4
Uncharacterized protein.
    
 0.588
STARD10
StAR-related lipid transfer (START) domain containing 15.
      
 0.538
USH1G
USH1 protein network component sans.
   
 0.531
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
   
 
 0.514
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.