Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLXDC1Plexin domain containing 1. (501 aa)    
Predicted Functional Partners:
CD248
CD248 molecule, endosialin a.
   
  
 0.603
TUBGCP3
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.589
AGTRAP
Angiotensin II receptor associated protein.
      
 0.586
NRF1
Nuclear respiratory factor 1.
    
   0.564
MYSM1
Myb like, SWIRM and MPN domains 1.
      
 0.552
KMT2E
Lysine methyltransferase 2E.
      
 0.550
RASD2
RASD family member 2.
      
 0.528
MTMR10
Myotubularin related protein 10.
      
 0.510
H2ZZ75_LATCH
Uncharacterized protein.
      
 0.487
WDR74
WD repeat domain 74.
      
 0.462
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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