STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP11Ubiquitin specific peptidase 11. (572 aa)    
Predicted Functional Partners:
NFKBIA
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
    
 0.812
USP7
Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family.
   
 0.749
LOC102356738
USP domain-containing protein; Belongs to the peptidase C19 family.
 
 
 0.746
RNF123
RING-type domain-containing protein.
   
 0.712
LOC102353140
Ring finger protein 123.
   
 0.712
USP1
Ubiquitin specific peptidase 1; Belongs to the peptidase C19 family.
    
 
 0.625
H3AGP4_LATCH
Tower domain-containing protein.
    
 
 0.615
USP14
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.609
UBA7
Uncharacterized protein; Belongs to the ubiquitin-activating E1 family.
   
 
 0.608
USP30
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.591
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.