Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTGER3Prostaglandin E receptor 3. (346 aa)    
Predicted Functional Partners:
C8orf37
Chromosome 8 open reading frame 37.
      
 0.802
LOC102359416
Uncharacterized protein.
    
 0.733
GNA11
G protein subunit alpha 11.
    
 0.733
EMC4
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
    
 
 0.641
BDNF
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
      
 0.641
GNB4
G protein subunit beta 4.
    
 0.605
GNB1
G protein subunit beta 1.
    
 0.605
DCTN5
Dynactin subunit 5.
      
 0.593
TSNAX
Translin-associated factor X.
      
 0.593
ENOX1
Ecto-NOX disulfide-thiol exchanger 1.
      
 0.589
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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